STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103389871Par-3 family cell polarity regulator beta a. (1243 aa)    
Predicted Functional Partners:
prkcz
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
    
 0.820
prkci
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
    
 0.820
LOC103379842
Par-6 family cell polarity regulator alpha.
    
 0.764
pard6b
Par-6 partitioning defective 6 homolog beta (C. elegans).
    
 0.764
LOC103394408
Par-6 family cell polarity regulator gamma b.
    
 0.764
ift80
Intraflagellar transport 80 homolog (Chlamydomonas).
    
 0.597
Ift172
Intraflagellar transport 172.
    
 0.585
traf3ip1
TNF receptor-associated factor 3 interacting protein 1.
    
 0.584
CASK
Calcium/calmodulin dependent serine protein kinase.
    
 0.550
ENSCSEP00000001398
Protein kinase domain-containing protein.
    
 0.550
Your Current Organism:
Cynoglossus semilaevis
NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole
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