STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103383898Matrin-type domain-containing protein. (1640 aa)    
Predicted Functional Partners:
Pcm1
Pericentriolar material 1.
  
   0.608
arid4b
Translocase of outer mitochondrial membrane 20.
   
 0.575
SENP6
SUMO specific peptidase 6.
   
   0.557
ENSCSEP00000001081
Uncharacterized protein.
   
 0.549
u2surp
U2 snRNP-associated SURP domain containing.
   
    0.533
LOC103395556
Zgc:163098.
   
    0.533
LOC103384833
Zinc finger protein 219.
  
 
  0.513
ENSCSEP00000027855
Ig-like domain-containing protein.
  
 
  0.498
sf3b1
Splicing factor 3b, subunit 1.
   
   0.483
tcf20
Transcription factor 20.
  
 0.480
Your Current Organism:
Cynoglossus semilaevis
NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.