Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC103377473 | LOC103392792 | ENSCSEP00000000743 | ENSCSEP00000017330 | Charged multivesicular body protein 4C. | Charged multivesicular body protein 6a. | 0.870 |
LOC103377473 | MLKL | ENSCSEP00000000743 | ENSCSEP00000002665 | Charged multivesicular body protein 4C. | Mixed lineage kinase domain like pseudokinase. | 0.906 |
LOC103377473 | chmp2a | ENSCSEP00000000743 | ENSCSEP00000022888 | Charged multivesicular body protein 4C. | Charged multivesicular body protein 2A. | 0.953 |
LOC103377473 | chmp3 | ENSCSEP00000000743 | ENSCSEP00000001956 | Charged multivesicular body protein 4C. | Charged multivesicular body protein 3. | 0.959 |
LOC103377473 | chmp4b | ENSCSEP00000000743 | ENSCSEP00000030864 | Charged multivesicular body protein 4C. | Charged multivesicular body protein 4Bb. | 0.911 |
LOC103377473 | chmp6 | ENSCSEP00000000743 | ENSCSEP00000002101 | Charged multivesicular body protein 4C. | Charged multivesicular body protein 6. | 0.870 |
LOC103377473 | snf8 | ENSCSEP00000000743 | ENSCSEP00000022949 | Charged multivesicular body protein 4C. | Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family. | 0.882 |
LOC103377473 | vps25 | ENSCSEP00000000743 | ENSCSEP00000012322 | Charged multivesicular body protein 4C. | Vacuolar protein sorting 25 homolog. | 0.858 |
LOC103377473 | vps28 | ENSCSEP00000000743 | ENSCSEP00000028167 | Charged multivesicular body protein 4C. | Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process. | 0.763 |
LOC103377473 | vps36 | ENSCSEP00000000743 | ENSCSEP00000014306 | Charged multivesicular body protein 4C. | Vacuolar protein sorting 36 homolog. | 0.839 |
LOC103392792 | LOC103377473 | ENSCSEP00000017330 | ENSCSEP00000000743 | Charged multivesicular body protein 6a. | Charged multivesicular body protein 4C. | 0.870 |
LOC103392792 | MLKL | ENSCSEP00000017330 | ENSCSEP00000002665 | Charged multivesicular body protein 6a. | Mixed lineage kinase domain like pseudokinase. | 0.900 |
LOC103392792 | chmp2a | ENSCSEP00000017330 | ENSCSEP00000022888 | Charged multivesicular body protein 6a. | Charged multivesicular body protein 2A. | 0.919 |
LOC103392792 | chmp3 | ENSCSEP00000017330 | ENSCSEP00000001956 | Charged multivesicular body protein 6a. | Charged multivesicular body protein 3. | 0.915 |
LOC103392792 | chmp4b | ENSCSEP00000017330 | ENSCSEP00000030864 | Charged multivesicular body protein 6a. | Charged multivesicular body protein 4Bb. | 0.870 |
LOC103392792 | chmp6 | ENSCSEP00000017330 | ENSCSEP00000002101 | Charged multivesicular body protein 6a. | Charged multivesicular body protein 6. | 0.901 |
LOC103392792 | snf8 | ENSCSEP00000017330 | ENSCSEP00000022949 | Charged multivesicular body protein 6a. | Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family. | 0.964 |
LOC103392792 | vps25 | ENSCSEP00000017330 | ENSCSEP00000012322 | Charged multivesicular body protein 6a. | Vacuolar protein sorting 25 homolog. | 0.968 |
LOC103392792 | vps28 | ENSCSEP00000017330 | ENSCSEP00000028167 | Charged multivesicular body protein 6a. | Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process. | 0.889 |
LOC103392792 | vps36 | ENSCSEP00000017330 | ENSCSEP00000014306 | Charged multivesicular body protein 6a. | Vacuolar protein sorting 36 homolog. | 0.954 |
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