Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BANF1 | ENSCSEP00000012741 | ENSCSEP00000017346 | ENSCSEP00000012741 | Barrier to autointegration factor 1. | LEM domain-containing protein. | 0.653 |
BANF1 | ENSCSEP00000025647 | ENSCSEP00000017346 | ENSCSEP00000025647 | Barrier to autointegration factor 1. | LEM domain containing 3. | 0.753 |
BANF1 | LMNA | ENSCSEP00000017346 | ENSCSEP00000015059 | Barrier to autointegration factor 1. | Lamin A/C; Belongs to the intermediate filament family. | 0.694 |
BANF1 | LMNA-2 | ENSCSEP00000017346 | ENSCSEP00000018765 | Barrier to autointegration factor 1. | Lamin A/C; Belongs to the intermediate filament family. | 0.694 |
BANF1 | LOC103379225 | ENSCSEP00000017346 | ENSCSEP00000012871 | Barrier to autointegration factor 1. | Lamin L3; Belongs to the intermediate filament family. | 0.694 |
BANF1 | LOC103385498 | ENSCSEP00000017346 | ENSCSEP00000033190 | Barrier to autointegration factor 1. | RNA binding motif protein 39b. | 0.670 |
BANF1 | LOC103386831 | ENSCSEP00000017346 | ENSCSEP00000031815 | Barrier to autointegration factor 1. | Uncharacterized protein. | 0.670 |
BANF1 | lmnb2 | ENSCSEP00000017346 | ENSCSEP00000030602 | Barrier to autointegration factor 1. | Lamin B2; Belongs to the intermediate filament family. | 0.709 |
BANF1 | vrk1 | ENSCSEP00000017346 | ENSCSEP00000006067 | Barrier to autointegration factor 1. | VRK serine/threonine kinase 1; Belongs to the protein kinase superfamily. | 0.659 |
BANF1 | vrk2 | ENSCSEP00000017346 | ENSCSEP00000002877 | Barrier to autointegration factor 1. | VRK serine/threonine kinase 2. | 0.659 |
ENSCSEP00000012741 | BANF1 | ENSCSEP00000012741 | ENSCSEP00000017346 | LEM domain-containing protein. | Barrier to autointegration factor 1. | 0.653 |
ENSCSEP00000012741 | LOC103385498 | ENSCSEP00000012741 | ENSCSEP00000033190 | LEM domain-containing protein. | RNA binding motif protein 39b. | 0.401 |
ENSCSEP00000012741 | LOC103386831 | ENSCSEP00000012741 | ENSCSEP00000031815 | LEM domain-containing protein. | Uncharacterized protein. | 0.401 |
ENSCSEP00000012741 | vrk1 | ENSCSEP00000012741 | ENSCSEP00000006067 | LEM domain-containing protein. | VRK serine/threonine kinase 1; Belongs to the protein kinase superfamily. | 0.755 |
ENSCSEP00000012741 | vrk2 | ENSCSEP00000012741 | ENSCSEP00000002877 | LEM domain-containing protein. | VRK serine/threonine kinase 2. | 0.755 |
ENSCSEP00000025647 | BANF1 | ENSCSEP00000025647 | ENSCSEP00000017346 | LEM domain containing 3. | Barrier to autointegration factor 1. | 0.753 |
ENSCSEP00000025647 | LMNA | ENSCSEP00000025647 | ENSCSEP00000015059 | LEM domain containing 3. | Lamin A/C; Belongs to the intermediate filament family. | 0.707 |
ENSCSEP00000025647 | LMNA-2 | ENSCSEP00000025647 | ENSCSEP00000018765 | LEM domain containing 3. | Lamin A/C; Belongs to the intermediate filament family. | 0.707 |
ENSCSEP00000025647 | LOC103379225 | ENSCSEP00000025647 | ENSCSEP00000012871 | LEM domain containing 3. | Lamin L3; Belongs to the intermediate filament family. | 0.707 |
ENSCSEP00000025647 | lmnb2 | ENSCSEP00000025647 | ENSCSEP00000030602 | LEM domain containing 3. | Lamin B2; Belongs to the intermediate filament family. | 0.707 |
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