Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Kcnf1 | znf236 | ENSCSEP00000032659 | ENSCSEP00000018084 | Potassium voltage-gated channel, subfamily F, member 1a; Belongs to the potassium channel family. | Zinc finger protein 236. | 0.435 |
LOC103384407 | TFB2M | ENSCSEP00000028427 | ENSCSEP00000012877 | Uncharacterized protein. | rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. | 0.676 |
LOC103384407 | capn15 | ENSCSEP00000028427 | ENSCSEP00000029535 | Uncharacterized protein. | Calpain 15; Belongs to the peptidase C2 family. | 0.575 |
LOC103384407 | med8 | ENSCSEP00000028427 | ENSCSEP00000000581 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 8; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.575 |
LOC103384407 | znf236 | ENSCSEP00000028427 | ENSCSEP00000018084 | Uncharacterized protein. | Zinc finger protein 236. | 0.455 |
LOC103392282 | znf236 | ENSCSEP00000020800 | ENSCSEP00000018084 | RAN binding protein 2. | Zinc finger protein 236. | 0.462 |
TFB2M | LOC103384407 | ENSCSEP00000012877 | ENSCSEP00000028427 | rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. | Uncharacterized protein. | 0.676 |
TFB2M | capn15 | ENSCSEP00000012877 | ENSCSEP00000029535 | rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. | Calpain 15; Belongs to the peptidase C2 family. | 0.672 |
TFB2M | med8 | ENSCSEP00000012877 | ENSCSEP00000000581 | rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. | Mediator of RNA polymerase II transcription subunit 8; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.676 |
TFB2M | znf236 | ENSCSEP00000012877 | ENSCSEP00000018084 | rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. | Zinc finger protein 236. | 0.601 |
ca8 | znf236 | ENSCSEP00000026920 | ENSCSEP00000018084 | Carbonic anhydrase VIII; Belongs to the alpha-carbonic anhydrase family. | Zinc finger protein 236. | 0.569 |
capn15 | LOC103384407 | ENSCSEP00000029535 | ENSCSEP00000028427 | Calpain 15; Belongs to the peptidase C2 family. | Uncharacterized protein. | 0.575 |
capn15 | TFB2M | ENSCSEP00000029535 | ENSCSEP00000012877 | Calpain 15; Belongs to the peptidase C2 family. | rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. | 0.672 |
capn15 | med8 | ENSCSEP00000029535 | ENSCSEP00000000581 | Calpain 15; Belongs to the peptidase C2 family. | Mediator of RNA polymerase II transcription subunit 8; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.465 |
capn15 | znf236 | ENSCSEP00000029535 | ENSCSEP00000018084 | Calpain 15; Belongs to the peptidase C2 family. | Zinc finger protein 236. | 0.617 |
ercc6 | znf236 | ENSCSEP00000011405 | ENSCSEP00000018084 | Excision repair cross-complementation group 6. | Zinc finger protein 236. | 0.627 |
med8 | LOC103384407 | ENSCSEP00000000581 | ENSCSEP00000028427 | Mediator of RNA polymerase II transcription subunit 8; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Uncharacterized protein. | 0.575 |
med8 | TFB2M | ENSCSEP00000000581 | ENSCSEP00000012877 | Mediator of RNA polymerase II transcription subunit 8; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. | 0.676 |
med8 | capn15 | ENSCSEP00000000581 | ENSCSEP00000029535 | Mediator of RNA polymerase II transcription subunit 8; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Calpain 15; Belongs to the peptidase C2 family. | 0.465 |
med8 | znf236 | ENSCSEP00000000581 | ENSCSEP00000018084 | Mediator of RNA polymerase II transcription subunit 8; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Zinc finger protein 236. | 0.534 |
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