STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lipeLipase, hormone-sensitive b. (827 aa)    
Predicted Functional Partners:
prkacb
Uncharacterized protein; Belongs to the protein kinase superfamily.
     
 0.937
LOC103392719
Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily.
     
 0.937
LOC103396312
Uncharacterized protein; Belongs to the protein kinase superfamily.
     
 0.937
prkar1a
Protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1) b.
     
 0.906
prkar2a
Protein kinase, cAMP-dependent, regulatory, type II, alpha A.
     
 0.906
LOC103393535
Protein kinase cAMP-dependent type I regulatory subunit alpha.
     
 0.906
prkar1b
Protein kinase, cAMP-dependent, regulatory, type I, beta.
     
 0.906
LOC103393953
Lipase, hormone-sensitive a.
  
  
 
0.902
ABHD5
Abhydrolase domain containing 5.
    
 0.750
kynu
Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively; Belongs to the kynureninase family.
  
 
 0.696
Your Current Organism:
Cynoglossus semilaevis
NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole
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