Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSCSEP00000016523 | cebpz | ENSCSEP00000016523 | ENSCSEP00000008849 | LTV1 ribosome biogenesis factor. | CCAAT enhancer binding protein zeta. | 0.816 |
ENSCSEP00000016523 | dkc1 | ENSCSEP00000016523 | ENSCSEP00000019800 | LTV1 ribosome biogenesis factor. | Dyskeratosis congenita 1, dyskerin. | 0.450 |
ENSCSEP00000016523 | fbl | ENSCSEP00000016523 | ENSCSEP00000016020 | LTV1 ribosome biogenesis factor. | Fibrillarin. | 0.640 |
ENSCSEP00000016523 | nolc1 | ENSCSEP00000016523 | ENSCSEP00000018718 | LTV1 ribosome biogenesis factor. | Nucleolar and coiled-body phosphoprotein 1. | 0.824 |
ENSCSEP00000016523 | nop56 | ENSCSEP00000016523 | ENSCSEP00000011161 | LTV1 ribosome biogenesis factor. | NOP56 ribonucleoprotein homolog. | 0.648 |
ENSCSEP00000016523 | nop58 | ENSCSEP00000016523 | ENSCSEP00000006789 | LTV1 ribosome biogenesis factor. | NOP58 ribonucleoprotein homolog (yeast). | 0.835 |
ENSCSEP00000016523 | polr1a | ENSCSEP00000016523 | ENSCSEP00000031564 | LTV1 ribosome biogenesis factor. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.436 |
ENSCSEP00000016523 | polr1b | ENSCSEP00000016523 | ENSCSEP00000013295 | LTV1 ribosome biogenesis factor. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.691 |
ENSCSEP00000016523 | rsl1d1 | ENSCSEP00000016523 | ENSCSEP00000030752 | LTV1 ribosome biogenesis factor. | Ribosomal L1 domain containing 1. | 0.783 |
cebpz | ENSCSEP00000016523 | ENSCSEP00000008849 | ENSCSEP00000016523 | CCAAT enhancer binding protein zeta. | LTV1 ribosome biogenesis factor. | 0.816 |
cebpz | dkc1 | ENSCSEP00000008849 | ENSCSEP00000019800 | CCAAT enhancer binding protein zeta. | Dyskeratosis congenita 1, dyskerin. | 0.886 |
cebpz | fbl | ENSCSEP00000008849 | ENSCSEP00000016020 | CCAAT enhancer binding protein zeta. | Fibrillarin. | 0.826 |
cebpz | nolc1 | ENSCSEP00000008849 | ENSCSEP00000018718 | CCAAT enhancer binding protein zeta. | Nucleolar and coiled-body phosphoprotein 1. | 0.854 |
cebpz | nop56 | ENSCSEP00000008849 | ENSCSEP00000011161 | CCAAT enhancer binding protein zeta. | NOP56 ribonucleoprotein homolog. | 0.948 |
cebpz | nop58 | ENSCSEP00000008849 | ENSCSEP00000006789 | CCAAT enhancer binding protein zeta. | NOP58 ribonucleoprotein homolog (yeast). | 0.964 |
cebpz | polr1a | ENSCSEP00000008849 | ENSCSEP00000031564 | CCAAT enhancer binding protein zeta. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.845 |
cebpz | polr1b | ENSCSEP00000008849 | ENSCSEP00000013295 | CCAAT enhancer binding protein zeta. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.934 |
cebpz | rsl1d1 | ENSCSEP00000008849 | ENSCSEP00000030752 | CCAAT enhancer binding protein zeta. | Ribosomal L1 domain containing 1. | 0.945 |
cebpz | trub1 | ENSCSEP00000008849 | ENSCSEP00000017560 | CCAAT enhancer binding protein zeta. | TruB pseudouridine (psi) synthase family member 1. | 0.696 |
dkc1 | ENSCSEP00000016523 | ENSCSEP00000019800 | ENSCSEP00000016523 | Dyskeratosis congenita 1, dyskerin. | LTV1 ribosome biogenesis factor. | 0.450 |
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