STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fbxo11Uncharacterized protein. (880 aa)    
Predicted Functional Partners:
skp1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
    
 0.945
cul1
Cullin 1b; Belongs to the cullin family.
   
 0.877
rbx1
Ring-box 1, E3 ubiquitin protein ligase.
    
 0.734
UBA3
Ubiquitin like modifier activating enzyme 3.
    
 0.662
LOC103388364
Ubiquitin-like domain-containing protein.
    
 0.660
ENSCSEP00000013162
CULLIN_2 domain-containing protein; Belongs to the cullin family.
   
 0.631
ENSCSEP00000017917
CULLIN_2 domain-containing protein; Belongs to the cullin family.
   
 0.631
LOC103389006
CULLIN_2 domain-containing protein; Belongs to the cullin family.
   
 0.631
ENSCSEP00000024100
Cullin domain-containing protein; Belongs to the cullin family.
   
 0.631
cul3
Cullin 3; Belongs to the cullin family.
   
 0.631
Your Current Organism:
Cynoglossus semilaevis
NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.