STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pds5bPDS5 cohesin associated factor B. (1405 aa)    
Predicted Functional Partners:
smc3
Structural maintenance of chromosomes 3.
   
 0.979
smc1a
Structural maintenance of chromosomes protein.
   
 0.928
LOC103379931
Structural maintenance of chromosomes protein.
   
 0.916
ENSCSEP00000011663
Uncharacterized protein.
   
 0.916
LOC103388613
RAD21 cohesin complex component a.
   
 0.906
RAD21
RAD21 cohesin complex component.
   
 0.906
LOC103385399
RAD21 cohesin complex component like 1.
   
 0.906
ENSCSEP00000004725
Rad21_Rec8_N domain-containing protein.
   
 0.879
esco2
Establishment of sister chromatid cohesion N-acetyltransferase 2.
   
 0.866
LOC103377420
Uncharacterized protein.
   
 0.866
Your Current Organism:
Cynoglossus semilaevis
NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.