STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCSEP00000019583Parvalbumin 5; Belongs to the parvalbumin family. (71 aa)    
Predicted Functional Partners:
CASK
Calcium/calmodulin dependent serine protein kinase.
    
 0.669
ENSCSEP00000001398
Protein kinase domain-containing protein.
    
 0.669
CASK-2
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
    
 0.669
wdr90
WD repeat domain 90.
   
 0.552
xpc
Xeroderma pigmentosum, complementation group C.
    
 0.490
LOC103378170
Doublecortin-like kinase 1b.
   
 0.476
Dclk1
Doublecortin-like kinase 1a.
   
 0.476
LOC103392065
NME/NM23 family member 8; Belongs to the NDK family.
   
 
 0.424
ENSCSEP00000002894
Myosin IXAb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.405
Myo9a
Myosin IXAa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.405
Your Current Organism:
Cynoglossus semilaevis
NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.