STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103393555Homeobox B2a. (316 aa)    
Predicted Functional Partners:
fgf4
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
   
 
 0.617
LOC103396957
Uncharacterized protein.
   
 0.554
isl1
ISL LIM homeobox 1.
   
 0.554
ENSCSEP00000022777
DNA helicase; Belongs to the MCM family.
   
  
 0.540
LOC103381988
Noggin; Belongs to the noggin family.
      
 0.536
hoxb5
Homeobox B5b.
   
 
0.472
LOC103388952
Pre-B-cell leukemia homeobox 2.
    
 0.461
pknox1
Pbx/knotted 1 homeobox 1.1.
   
 0.457
LOC103397458
Bone morphogenetic protein 10.
   
  
 0.455
snai2
Snail family zinc finger 2.
   
 
 0.446
Your Current Organism:
Cynoglossus semilaevis
NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.