STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ppm1gProtein phosphatase, Mg2+/Mn2+ dependent, 1G. (604 aa)    
Predicted Functional Partners:
usp7
Ubiquitin specific peptidase 7 (herpes virus-associated); Belongs to the peptidase C19 family.
   
 0.683
ENSCSEP00000030272
Uncharacterized protein.
      
 0.658
Trip12
Thyroid hormone receptor interactor 12.
      
 0.658
sf3a2
Splicing factor 3a, subunit 2.
   
  
 0.606
ppil4
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.
   
 0.591
sirt7
Sirtuin 7.
    
 
 0.570
mmgt1
Membrane magnesium transporter 1.
      
 0.542
usp40
Ubiquitin specific peptidase 40; Belongs to the peptidase C19 family.
   
 0.536
ppp4c
Serine/threonine-protein phosphatase.
   
 
 0.534
sac3d1
Si:zfos-452g4.1.
      
 0.532
Your Current Organism:
Cynoglossus semilaevis
NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.