STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zcchc14Zinc finger, CCHC domain containing 14. (665 aa)    
Predicted Functional Partners:
ENSCSEP00000021923
Uncharacterized protein.
 
 
  
 0.835
LOC103388317
Uncharacterized protein.
   
 
 0.748
tent4b
Terminal nucleotidyltransferase 4B.
   
 
 0.748
tent4a
Terminal nucleotidyltransferase 4A.
   
 
 0.748
mtrex
Mtr4 exosome RNA helicase.
   
 
 0.654
gtpbp4
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
   0.508
slc25a21
Solute carrier family 25 member 21; Belongs to the mitochondrial carrier (TC 2.A.29) family.
    
 
 0.497
xrn1
5'-3' exoribonuclease 1.
    
 
 0.485
mak16
Protein MAK16 homolog; Belongs to the MAK16 family.
   
   0.459
skiv2l
SKI2 homolog, superkiller viralicidic activity 2-like.
   
 
 0.459
Your Current Organism:
Cynoglossus semilaevis
NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.