STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chmp2aCharged multivesicular body protein 2A. (220 aa)    
Predicted Functional Partners:
chmp3
Charged multivesicular body protein 3.
   
0.997
LOC103391323
Uncharacterized protein.
   
0.990
chmp1b
Chromatin modifying protein 1B.
   
0.990
Chmp1a
Charged multivesicular body protein 1A.
   
0.990
chmp2b
Charged multivesicular body protein 2Bb.
   
0.989
hgs
Hepatocyte growth factor-regulated tyrosine kinase substrate.
    
 0.975
ist1
IST1 factor associated with ESCRT-III.
    
 0.968
LOC103377456
Charged multivesicular body protein 5b.
   
 0.953
LOC103377473
Charged multivesicular body protein 4C.
   
 0.953
LOC103396414
Charged multivesicular body protein 5a.
   
 0.953
Your Current Organism:
Cynoglossus semilaevis
NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.