STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cfap70Uncharacterized protein. (1025 aa)    
Predicted Functional Partners:
ENSCSEP00000004017
Intersectin 2a.
    
 0.820
ENSCSEP00000012919
Uncharacterized protein.
    
 0.820
ENSCSEP00000012961
Uncharacterized protein.
    
 0.820
ENSCSEP00000001081
Uncharacterized protein.
   
 0.750
itsn1
Intersectin 1 (SH3 domain protein).
    
 0.720
LOC103389777
Trafficking protein, kinesin binding 2.
    
 0.684
prkn
E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily.
    
 0.672
wdr90
WD repeat domain 90.
 
 
 0.670
LOC103388301
Trafficking protein, kinesin binding 1a.
    
 0.653
LOC103394497
Uncharacterized protein.
    
 0.653
Your Current Organism:
Cynoglossus semilaevis
NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole
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