STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103377138Spermatogenesis associated 13. (1283 aa)    
Predicted Functional Partners:
RAC1
Rac family small GTPase 1.
    
 0.952
LOC103383441
Rac family small GTPase 2.
    
 0.952
LOC103381664
Rac family small GTPase 3b.
    
 0.952
LOC103393020
Uncharacterized protein.
    
 0.952
Apc
APC_N_CC domain-containing protein.
   
 0.947
ENSCSEP00000018661
Uncharacterized protein.
    
 0.934
ARHGEF4
Rho guanine nucleotide exchange factor 4.
     
 
0.900
LOC103386293
Uncharacterized protein.
    
 0.715
CDC42
Cell division cycle 42.
    
 0.715
LOC103391135
Gamma-aminobutyric acid type A receptor alpha2 subunit; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
 
 0.630
Your Current Organism:
Cynoglossus semilaevis
NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.