Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Gli2 | LOC103378403 | ENSCSEP00000024229 | ENSCSEP00000025499 | GLI family zinc finger 2a. | Arrestin, beta 1. | 0.905 |
Gli2 | arrb2 | ENSCSEP00000024229 | ENSCSEP00000032321 | GLI family zinc finger 2a. | Arrestin, beta 2a. | 0.905 |
Gli2 | gli1 | ENSCSEP00000024229 | ENSCSEP00000016965 | GLI family zinc finger 2a. | GLI family zinc finger 1. | 0.913 |
Gli2 | gli3 | ENSCSEP00000024229 | ENSCSEP00000030598 | GLI family zinc finger 2a. | GLI family zinc finger 3. | 0.913 |
Gli2 | kif3a | ENSCSEP00000024229 | ENSCSEP00000023632 | GLI family zinc finger 2a. | Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | 0.942 |
LOC103378403 | Gli2 | ENSCSEP00000025499 | ENSCSEP00000024229 | Arrestin, beta 1. | GLI family zinc finger 2a. | 0.905 |
LOC103378403 | arrb2 | ENSCSEP00000025499 | ENSCSEP00000032321 | Arrestin, beta 1. | Arrestin, beta 2a. | 0.901 |
LOC103378403 | gli1 | ENSCSEP00000025499 | ENSCSEP00000016965 | Arrestin, beta 1. | GLI family zinc finger 1. | 0.904 |
LOC103378403 | gli3 | ENSCSEP00000025499 | ENSCSEP00000030598 | Arrestin, beta 1. | GLI family zinc finger 3. | 0.904 |
LOC103378403 | kif3a | ENSCSEP00000025499 | ENSCSEP00000023632 | Arrestin, beta 1. | Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | 0.935 |
LOC103380442 | LOC103396560 | ENSCSEP00000010159 | ENSCSEP00000028440 | Uncharacterized protein. | Kinesin-associated protein 3b. | 0.845 |
LOC103380442 | LOC103399332 | ENSCSEP00000010159 | ENSCSEP00000001806 | Uncharacterized protein. | Kinesin-associated protein 3a. | 0.845 |
LOC103380442 | kif3a | ENSCSEP00000010159 | ENSCSEP00000023632 | Uncharacterized protein. | Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | 0.934 |
LOC103396560 | LOC103380442 | ENSCSEP00000028440 | ENSCSEP00000010159 | Kinesin-associated protein 3b. | Uncharacterized protein. | 0.845 |
LOC103396560 | kif3a | ENSCSEP00000028440 | ENSCSEP00000023632 | Kinesin-associated protein 3b. | Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | 0.984 |
LOC103396560 | kif3b | ENSCSEP00000028440 | ENSCSEP00000005840 | Kinesin-associated protein 3b. | Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | 0.924 |
LOC103396560 | kif3c | ENSCSEP00000028440 | ENSCSEP00000005202 | Kinesin-associated protein 3b. | Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | 0.887 |
LOC103399332 | LOC103380442 | ENSCSEP00000001806 | ENSCSEP00000010159 | Kinesin-associated protein 3a. | Uncharacterized protein. | 0.845 |
LOC103399332 | kif3a | ENSCSEP00000001806 | ENSCSEP00000023632 | Kinesin-associated protein 3a. | Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | 0.984 |
LOC103399332 | kif3b | ENSCSEP00000001806 | ENSCSEP00000005840 | Kinesin-associated protein 3a. | Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | 0.924 |
page 1 of 3