STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103394304Mothers against decapentaplegic homolog. (573 aa)    
Predicted Functional Partners:
LOC103380246
Mothers against decapentaplegic homolog.
   
0.974
SMAD3
Mothers against decapentaplegic homolog.
   
0.974
smad1
Mothers against decapentaplegic homolog.
   
0.971
smad9
Mothers against decapentaplegic homolog.
   
0.971
LOC103391130
Mothers against decapentaplegic homolog.
   
0.971
LOC103384737
V-ski avian sarcoma viral oncogene homolog a.
   
 0.925
LOC103397887
Mothers against decapentaplegic homolog.
  
  
 
0.901
SMAD4
Mothers against decapentaplegic homolog.
  
  
 
0.901
LOC103396454
SKI-like proto-oncogene a.
   
 0.857
LOC103396445
E2F transcription factor 5.
    
 0.854
Your Current Organism:
Cynoglossus semilaevis
NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.