STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
srebf1Sterol regulatory element binding transcription factor 1. (1172 aa)    
Predicted Functional Partners:
scap
SREBF chaperone.
   
 0.948
kpnb1
Karyopherin (importin) beta 1.
    
 0.811
ENSCSEP00000012640
SSD domain-containing protein.
   
 0.768
NPC1L1
NPC1 like intracellular cholesterol transporter 1.
   
 0.768
npc1
Niemann-Pick disease, type C1.
   
 0.768
mbtps2
Membrane-bound transcription factor peptidase, site 2.
    
 0.761
mbtps1
Membrane-bound transcription factor peptidase, site 1.
     
 0.671
fads2
Fatty acid desaturase 2.
   
  
 0.657
elovl5
Elongation of very long chain fatty acids protein.
      
 0.635
fasn
Coiled-coil domain containing 57.
   
 
 0.622
Your Current Organism:
Cynoglossus semilaevis
NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.