STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
spata22Spermatogenesis associated 22. (388 aa)    
Predicted Functional Partners:
meiob
Methionine sulfoxide reductase B1b.
      
 0.669
spata20
Spermatogenesis associated 20.
      
 0.665
hsf2bp
Heat shock transcription factor 2 binding protein.
      
 0.568
Syce3
Uncharacterized protein.
      
 0.555
sycp3
Synaptonemal complex protein 3.
      
 0.546
cdx4
Caudal type homeobox 4.
      
 0.516
spata7
Uncharacterized protein.
      
 0.513
Spata6
SPATA6 domain-containing protein.
      
 0.511
lrrc42
Leucine rich repeat containing 42.
      
 0.497
ENSCSEP00000027664
Helicase for meiosis 1.
      
 0.479
Your Current Organism:
Cynoglossus semilaevis
NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.