STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBXN4UBX domain protein 4. (487 aa)    
Predicted Functional Partners:
ubxn6
UBX domain protein 6.
    
 0.996
LOC103397105
Uncharacterized protein; Belongs to the AAA ATPase family.
   
 0.990
LOC103398200
Valosin containing protein; Belongs to the AAA ATPase family.
   
 0.990
nsfl1c
NSFL1 (p97) cofactor (p47).
    
 0.956
ubxn2a
UBX domain protein 2A.
    
 0.942
ubxn1
UBX domain protein 1.
     
0.941
Svip
Si:ch73-147o17.1.
     
 0.907
aspscr1
ASPSCR1 tether for SLC2A4, UBX domain containing.
    
 
 0.878
SPATA5
Spermatogenesis associated 5.
   
 
 0.720
spata5l1
Spermatogenesis associated 5-like 1.
   
 
 0.720
Your Current Organism:
Cynoglossus semilaevis
NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.