STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103395384Neural cell adhesion molecule 1a. (788 aa)    
Predicted Functional Partners:
cntn2
Contactin 2.
   
0.575
ENSCSEP00000010570
Neurocan b.
   
 0.539
ENSCSEP00000018953
Versican a.
    
 0.512
LOC103398905
Uncharacterized protein.
    
 0.512
ENSCSEP00000021595
GDNF domain-containing protein.
    
 0.501
LOC103387804
Uncharacterized protein.
    
 0.501
LOC103398250
Uncharacterized protein.
    
 0.488
ENSCSEP00000004346
Uncharacterized protein.
     
 0.483
Agrn
Agrin.
     
 0.483
EIF4ENIF1
Eukaryotic translation initiation factor 4E nuclear import factor 1.
    
 0.467
Your Current Organism:
Cynoglossus semilaevis
NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole
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