STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rbm26RNA binding motif protein 26. (1018 aa)    
Predicted Functional Partners:
ZFC3H1
Zinc finger C3H1-type containing.
   
 
 0.707
pabpn1l
EPABP2.
    
 
 0.562
pabpn1
Poly(A) binding protein, nuclear 1.
    
 
 0.562
mtrex
Mtr4 exosome RNA helicase.
   
 
 0.541
LOC103382382
RNA binding protein with serine rich domain 1.
    
 
 0.462
rnps1
RNA binding protein S1, serine-rich domain.
    
 
 0.462
skiv2l
SKI2 homolog, superkiller viralicidic activity 2-like.
   
 
 0.434
Your Current Organism:
Cynoglossus semilaevis
NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.