STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCSEP00000026216Uncharacterized protein. (100 aa)    
Predicted Functional Partners:
smc3
Structural maintenance of chromosomes 3.
   
 0.921
pds5a
PDS5 cohesin associated factor A.
   
 0.814
pds5b
PDS5 cohesin associated factor B.
   
 0.814
smc5
Structural maintenance of chromosomes 5.
   
 0.810
smc1a
Structural maintenance of chromosomes protein.
   
 0.780
LOC103379931
Structural maintenance of chromosomes protein.
   
 0.780
ENSCSEP00000011663
Uncharacterized protein.
   
 0.780
LOC103388613
RAD21 cohesin complex component a.
   
 0.769
RAD21
RAD21 cohesin complex component.
   
 0.769
LOC103385399
RAD21 cohesin complex component like 1.
   
 0.769
Your Current Organism:
Cynoglossus semilaevis
NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.