STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103394414Metadherin a. (510 aa)    
Predicted Functional Partners:
snd1
Staphylococcal nuclease domain-containing protein; Endonuclease that mediates miRNA decay of both protein-free and AGO2-loaded miRNAs.
    
 
 0.907
ints9
Integrator complex subunit 9.
    
 0.533
ints1
Integrator complex subunit 1.
    
 0.523
ints11
Integrator complex subunit 11.
    
 0.516
ints4
Integrator complex subunit 4.
    
 0.509
ints3
Integrator complex subunit 3.
    
 0.501
ints7
Integrator complex subunit 7.
    
 0.500
ints13
Integrator complex subunit 13.
    
 0.497
zcrb1
Zinc finger CCHC-type and RNA binding motif 1.
   
 
 0.495
bccip
Protein BCCIP homolog; Belongs to the BCP1 family.
    
 
 0.494
Your Current Organism:
Cynoglossus semilaevis
NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.