STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCSEP00000029309Low density lipoprotein receptor-related protein 8, apolipoprotein e receptor. (880 aa)    
Predicted Functional Partners:
RELN
Reelin.
    
 0.850
pcsk9
Proprotein convertase subtilisin/kexin type 9; Belongs to the peptidase S8 family.
    
 0.804
ldlrap1
Low density lipoprotein receptor adaptor protein 1b.
    
 0.717
dab1
DAB adaptor protein 1a.
    
 0.693
LOC103396189
DAB adaptor protein 1b.
    
 0.693
ENSCSEP00000004017
Intersectin 2a.
    
 0.588
ENSCSEP00000012919
Uncharacterized protein.
    
 0.588
ENSCSEP00000012961
Uncharacterized protein.
    
 0.588
ENSCSEP00000027680
Myosin regulatory light chain interacting protein a.
    
 0.577
faf1
Fas (TNFRSF6) associated factor 1.
      
 0.566
Your Current Organism:
Cynoglossus semilaevis
NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.