STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103398967Uncharacterized protein. (618 aa)    
Predicted Functional Partners:
ubxn7
UBX domain protein 7.
    
 0.953
cul2
Cullin 2; Belongs to the cullin family.
    
 0.808
eloc
Elongin C paralog a; Belongs to the SKP1 family.
    
 0.709
rbx1
Ring-box 1, E3 ubiquitin protein ligase.
    
 0.665
LOC103388364
Ubiquitin-like domain-containing protein.
    
  0.557
elob
Ubiquitin-like domain-containing protein.
    
 0.540
LOC103392679
Elongin B.
    
 0.540
commd8
COMM domain containing 8.
   
  0.532
LOC103385940
Von Hippel-Lindau tumor suppressor.
    
 0.527
LOC103380219
COMM domain containing 4.
    
  0.525
Your Current Organism:
Cynoglossus semilaevis
NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.