Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC103384251 | rer1 | ENSCSEP00000022927 | ENSCSEP00000029893 | Calmegin. | Protein RER1; Involved in the retrieval of endoplasmic reticulum membrane proteins from the early Golgi compartment. | 0.619 |
LOC103384251 | rpn1 | ENSCSEP00000022927 | ENSCSEP00000008373 | Calmegin. | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the en [...] | 0.627 |
LOC103384251 | sec63 | ENSCSEP00000022927 | ENSCSEP00000004144 | Calmegin. | SEC63 homolog, protein translocation regulator. | 0.752 |
LOC103390221 | copb2 | ENSCSEP00000027832 | ENSCSEP00000019388 | Surfeit 4. | Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. | 0.688 |
LOC103390221 | preb | ENSCSEP00000027832 | ENSCSEP00000016550 | Surfeit 4. | Prolactin regulatory element binding. | 0.445 |
LOC103390221 | rer1 | ENSCSEP00000027832 | ENSCSEP00000029893 | Surfeit 4. | Protein RER1; Involved in the retrieval of endoplasmic reticulum membrane proteins from the early Golgi compartment. | 0.675 |
LOC103390221 | rpn1 | ENSCSEP00000027832 | ENSCSEP00000008373 | Surfeit 4. | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the en [...] | 0.577 |
LOC103390221 | sec63 | ENSCSEP00000027832 | ENSCSEP00000004144 | Surfeit 4. | SEC63 homolog, protein translocation regulator. | 0.440 |
LOC103390221 | tmed2 | ENSCSEP00000027832 | ENSCSEP00000019025 | Surfeit 4. | Transmembrane p24 trafficking protein 2. | 0.836 |
LOC103397973 | copb2 | ENSCSEP00000013591 | ENSCSEP00000019388 | Uncharacterized protein. | Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. | 0.688 |
LOC103397973 | preb | ENSCSEP00000013591 | ENSCSEP00000016550 | Uncharacterized protein. | Prolactin regulatory element binding. | 0.445 |
LOC103397973 | rer1 | ENSCSEP00000013591 | ENSCSEP00000029893 | Uncharacterized protein. | Protein RER1; Involved in the retrieval of endoplasmic reticulum membrane proteins from the early Golgi compartment. | 0.675 |
LOC103397973 | rpn1 | ENSCSEP00000013591 | ENSCSEP00000008373 | Uncharacterized protein. | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the en [...] | 0.577 |
LOC103397973 | sec63 | ENSCSEP00000013591 | ENSCSEP00000004144 | Uncharacterized protein. | SEC63 homolog, protein translocation regulator. | 0.440 |
LOC103397973 | tmed2 | ENSCSEP00000013591 | ENSCSEP00000019025 | Uncharacterized protein. | Transmembrane p24 trafficking protein 2. | 0.836 |
canx | rer1 | ENSCSEP00000019667 | ENSCSEP00000029893 | Calnexin. | Protein RER1; Involved in the retrieval of endoplasmic reticulum membrane proteins from the early Golgi compartment. | 0.619 |
canx | rpn1 | ENSCSEP00000019667 | ENSCSEP00000008373 | Calnexin. | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the en [...] | 0.627 |
canx | sec63 | ENSCSEP00000019667 | ENSCSEP00000004144 | Calnexin. | SEC63 homolog, protein translocation regulator. | 0.752 |
copb2 | LOC103390221 | ENSCSEP00000019388 | ENSCSEP00000027832 | Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. | Surfeit 4. | 0.688 |
copb2 | LOC103397973 | ENSCSEP00000019388 | ENSCSEP00000013591 | Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. | Uncharacterized protein. | 0.688 |
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