Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BANF1 | ENSCSEP00000025647 | ENSCSEP00000017346 | ENSCSEP00000025647 | Barrier to autointegration factor 1. | LEM domain containing 3. | 0.753 |
BANF1 | LMNA | ENSCSEP00000017346 | ENSCSEP00000015059 | Barrier to autointegration factor 1. | Lamin A/C; Belongs to the intermediate filament family. | 0.694 |
BANF1 | LMNA-2 | ENSCSEP00000017346 | ENSCSEP00000018765 | Barrier to autointegration factor 1. | Lamin A/C; Belongs to the intermediate filament family. | 0.694 |
BANF1 | lmnb2 | ENSCSEP00000017346 | ENSCSEP00000030602 | Barrier to autointegration factor 1. | Lamin B2; Belongs to the intermediate filament family. | 0.709 |
ENSCSEP00000025647 | BANF1 | ENSCSEP00000025647 | ENSCSEP00000017346 | LEM domain containing 3. | Barrier to autointegration factor 1. | 0.753 |
ENSCSEP00000025647 | LMNA | ENSCSEP00000025647 | ENSCSEP00000015059 | LEM domain containing 3. | Lamin A/C; Belongs to the intermediate filament family. | 0.707 |
ENSCSEP00000025647 | LMNA-2 | ENSCSEP00000025647 | ENSCSEP00000018765 | LEM domain containing 3. | Lamin A/C; Belongs to the intermediate filament family. | 0.707 |
ENSCSEP00000025647 | LOC103387033 | ENSCSEP00000025647 | ENSCSEP00000004366 | LEM domain containing 3. | Uncharacterized protein. | 0.753 |
ENSCSEP00000025647 | banf1 | ENSCSEP00000025647 | ENSCSEP00000016871 | LEM domain containing 3. | Barrier to autointegration factor 1. | 0.753 |
ENSCSEP00000025647 | lmnb2 | ENSCSEP00000025647 | ENSCSEP00000030602 | LEM domain containing 3. | Lamin B2; Belongs to the intermediate filament family. | 0.707 |
LMNA | BANF1 | ENSCSEP00000015059 | ENSCSEP00000017346 | Lamin A/C; Belongs to the intermediate filament family. | Barrier to autointegration factor 1. | 0.694 |
LMNA | ENSCSEP00000025647 | ENSCSEP00000015059 | ENSCSEP00000025647 | Lamin A/C; Belongs to the intermediate filament family. | LEM domain containing 3. | 0.707 |
LMNA | LMNA-2 | ENSCSEP00000015059 | ENSCSEP00000018765 | Lamin A/C; Belongs to the intermediate filament family. | Lamin A/C; Belongs to the intermediate filament family. | 0.901 |
LMNA | LOC103387033 | ENSCSEP00000015059 | ENSCSEP00000004366 | Lamin A/C; Belongs to the intermediate filament family. | Uncharacterized protein. | 0.694 |
LMNA | LOC103392320 | ENSCSEP00000015059 | ENSCSEP00000023503 | Lamin A/C; Belongs to the intermediate filament family. | Granzyme 3, tandem duplicate 4; Belongs to the peptidase S1 family. | 0.902 |
LMNA | LOC103399906 | ENSCSEP00000015059 | ENSCSEP00000004063 | Lamin A/C; Belongs to the intermediate filament family. | Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family. | 0.902 |
LMNA | banf1 | ENSCSEP00000015059 | ENSCSEP00000016871 | Lamin A/C; Belongs to the intermediate filament family. | Barrier to autointegration factor 1. | 0.694 |
LMNA | casp6 | ENSCSEP00000015059 | ENSCSEP00000015337 | Lamin A/C; Belongs to the intermediate filament family. | Caspase 6, apoptosis-related cysteine peptidase a; Belongs to the peptidase C14A family. | 0.960 |
LMNA | lmnb2 | ENSCSEP00000015059 | ENSCSEP00000030602 | Lamin A/C; Belongs to the intermediate filament family. | Lamin B2; Belongs to the intermediate filament family. | 0.909 |
LMNA | sun1 | ENSCSEP00000015059 | ENSCSEP00000022172 | Lamin A/C; Belongs to the intermediate filament family. | Sad1 and UNC84 domain containing 1. | 0.689 |
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