STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCSEP00000030877CDC42 effector protein (Rho GTPase binding) 1a. (319 aa)    
Predicted Functional Partners:
LOC103386293
Uncharacterized protein.
    
 0.681
CDC42
Cell division cycle 42.
    
 0.681
LOC103393775
Uncharacterized protein.
    
 0.584
LOC103387948
Uncharacterized protein.
    
 0.584
LOC103395657
Ras homolog family member Gb.
    
 0.494
ENSCSEP00000022405
Ras homolog gene family, member Gc.
    
 0.494
stxbp6
Syntaxin binding protein 6 (amisyn).
      
 0.485
Rhoh
Ras homolog family member H.
    
 0.460
rhoq
Ras homolog family member Q.
    
 0.460
Your Current Organism:
Cynoglossus semilaevis
NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole
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