Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSCSEP00000013604 | ENSCSEP00000020487 | ENSCSEP00000013604 | ENSCSEP00000020487 | Small nuclear ribonucleoprotein polypeptide A. | LUC7-like 3 pre-mRNA splicing factor. | 0.640 |
ENSCSEP00000013604 | LOC103380890 | ENSCSEP00000013604 | ENSCSEP00000032323 | Small nuclear ribonucleoprotein polypeptide A. | RNA binding motif protein 25b. | 0.916 |
ENSCSEP00000013604 | LOC103383755 | ENSCSEP00000013604 | ENSCSEP00000010281 | Small nuclear ribonucleoprotein polypeptide A. | Zgc:158803. | 0.891 |
ENSCSEP00000013604 | Snrnp70 | ENSCSEP00000013604 | ENSCSEP00000018706 | Small nuclear ribonucleoprotein polypeptide A. | Small nuclear ribonucleoprotein 70 (U1). | 0.990 |
ENSCSEP00000013604 | ddx46 | ENSCSEP00000013604 | ENSCSEP00000026437 | Small nuclear ribonucleoprotein polypeptide A. | DEAD (Asp-Glu-Ala-Asp) box polypeptide 46. | 0.992 |
ENSCSEP00000013604 | luc7l | ENSCSEP00000013604 | ENSCSEP00000019630 | Small nuclear ribonucleoprotein polypeptide A. | LUC7-like (S. cerevisiae). | 0.891 |
ENSCSEP00000013604 | sart1 | ENSCSEP00000013604 | ENSCSEP00000002990 | Small nuclear ribonucleoprotein polypeptide A. | Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP. | 0.990 |
ENSCSEP00000013604 | snrpc | ENSCSEP00000013604 | ENSCSEP00000026366 | Small nuclear ribonucleoprotein polypeptide A. | U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. SNRPC/U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. Belongs to the U1 [...] | 0.992 |
ENSCSEP00000013604 | srrm1 | ENSCSEP00000013604 | ENSCSEP00000000132 | Small nuclear ribonucleoprotein polypeptide A. | Serine/arginine repetitive matrix 1. | 0.696 |
ENSCSEP00000020487 | ENSCSEP00000013604 | ENSCSEP00000020487 | ENSCSEP00000013604 | LUC7-like 3 pre-mRNA splicing factor. | Small nuclear ribonucleoprotein polypeptide A. | 0.640 |
ENSCSEP00000020487 | LOC103380890 | ENSCSEP00000020487 | ENSCSEP00000032323 | LUC7-like 3 pre-mRNA splicing factor. | RNA binding motif protein 25b. | 0.942 |
ENSCSEP00000020487 | LOC103383755 | ENSCSEP00000020487 | ENSCSEP00000010281 | LUC7-like 3 pre-mRNA splicing factor. | Zgc:158803. | 0.521 |
ENSCSEP00000020487 | Snrnp70 | ENSCSEP00000020487 | ENSCSEP00000018706 | LUC7-like 3 pre-mRNA splicing factor. | Small nuclear ribonucleoprotein 70 (U1). | 0.898 |
ENSCSEP00000020487 | ddx46 | ENSCSEP00000020487 | ENSCSEP00000026437 | LUC7-like 3 pre-mRNA splicing factor. | DEAD (Asp-Glu-Ala-Asp) box polypeptide 46. | 0.730 |
ENSCSEP00000020487 | luc7l | ENSCSEP00000020487 | ENSCSEP00000019630 | LUC7-like 3 pre-mRNA splicing factor. | LUC7-like (S. cerevisiae). | 0.521 |
ENSCSEP00000020487 | prpf40a | ENSCSEP00000020487 | ENSCSEP00000017647 | LUC7-like 3 pre-mRNA splicing factor. | PRP40 pre-mRNA processing factor 40 homolog A. | 0.705 |
ENSCSEP00000020487 | sart1 | ENSCSEP00000020487 | ENSCSEP00000002990 | LUC7-like 3 pre-mRNA splicing factor. | Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP. | 0.856 |
ENSCSEP00000020487 | snrpc | ENSCSEP00000020487 | ENSCSEP00000026366 | LUC7-like 3 pre-mRNA splicing factor. | U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. SNRPC/U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. Belongs to the U1 [...] | 0.842 |
ENSCSEP00000020487 | srrm1 | ENSCSEP00000020487 | ENSCSEP00000000132 | LUC7-like 3 pre-mRNA splicing factor. | Serine/arginine repetitive matrix 1. | 0.510 |
LOC103380890 | ENSCSEP00000013604 | ENSCSEP00000032323 | ENSCSEP00000013604 | RNA binding motif protein 25b. | Small nuclear ribonucleoprotein polypeptide A. | 0.916 |
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