STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CNNM1-2Cyclin and CBS domain divalent metal cation transport mediator 1. (900 aa)    
Predicted Functional Partners:
gmps
Guanine monophosphate synthase.
  
 
 0.627
atic
5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase.
    
 0.526
nt5e
5'-nucleotidase ecto; Belongs to the 5'-nucleotidase family.
    
 0.513
LOC103389253
Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
  
  
 0.482
ybey
YbeY metalloendoribonuclease.
  
  
 0.450
Trpm7
Transient receptor potential cation channel, subfamily M, member 7.
    
 
 0.435
LOC103397405
Transient receptor potential cation channel, subfamily M, member 6.
    
 
 0.435
nipa1
NIPA magnesium transporter 1.
      
 0.433
LOC103394214
Protein tyrosine phosphatase 4A2b.
    
 
 0.424
ptp4a1
Protein tyrosine phosphatase 4A1.
    
 
 0.424
Your Current Organism:
Cynoglossus semilaevis
NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole
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