Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cul4b | ENSCSEP00000028052 | ENSCSEP00000003233 | ENSCSEP00000028052 | Cullin 4B; Belongs to the cullin family. | Chromatin licensing and DNA replication factor 1. | 0.701 |
Cul4b | LOC103378632 | ENSCSEP00000003233 | ENSCSEP00000000797 | Cullin 4B; Belongs to the cullin family. | Cullin 4A; Belongs to the cullin family. | 0.918 |
Cul4b | cdc6 | ENSCSEP00000003233 | ENSCSEP00000015415 | Cullin 4B; Belongs to the cullin family. | Cell division cycle 6 homolog (S. cerevisiae). | 0.534 |
Cul4b | ddb1 | ENSCSEP00000003233 | ENSCSEP00000019584 | Cullin 4B; Belongs to the cullin family. | Damage-specific DNA binding protein 1. | 0.979 |
Cul4b | dtl | ENSCSEP00000003233 | ENSCSEP00000032504 | Cullin 4B; Belongs to the cullin family. | Denticleless E3 ubiquitin protein ligase homolog (Drosophila). | 0.954 |
Cul4b | pcna | ENSCSEP00000003233 | ENSCSEP00000030429 | Cullin 4B; Belongs to the cullin family. | Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. | 0.695 |
Cul4b | rbx1 | ENSCSEP00000003233 | ENSCSEP00000010314 | Cullin 4B; Belongs to the cullin family. | Ring-box 1, E3 ubiquitin protein ligase. | 0.962 |
Cul4b | rfc1 | ENSCSEP00000003233 | ENSCSEP00000007615 | Cullin 4B; Belongs to the cullin family. | Replication factor C subunit 1. | 0.648 |
ENSCSEP00000028052 | Cul4b | ENSCSEP00000028052 | ENSCSEP00000003233 | Chromatin licensing and DNA replication factor 1. | Cullin 4B; Belongs to the cullin family. | 0.701 |
ENSCSEP00000028052 | LOC103378632 | ENSCSEP00000028052 | ENSCSEP00000000797 | Chromatin licensing and DNA replication factor 1. | Cullin 4A; Belongs to the cullin family. | 0.701 |
ENSCSEP00000028052 | cdc45 | ENSCSEP00000028052 | ENSCSEP00000030607 | Chromatin licensing and DNA replication factor 1. | CDC45 cell division cycle 45 homolog (S. cerevisiae). | 0.951 |
ENSCSEP00000028052 | cdc6 | ENSCSEP00000028052 | ENSCSEP00000015415 | Chromatin licensing and DNA replication factor 1. | Cell division cycle 6 homolog (S. cerevisiae). | 0.999 |
ENSCSEP00000028052 | ddb1 | ENSCSEP00000028052 | ENSCSEP00000019584 | Chromatin licensing and DNA replication factor 1. | Damage-specific DNA binding protein 1. | 0.807 |
ENSCSEP00000028052 | dtl | ENSCSEP00000028052 | ENSCSEP00000032504 | Chromatin licensing and DNA replication factor 1. | Denticleless E3 ubiquitin protein ligase homolog (Drosophila). | 0.949 |
ENSCSEP00000028052 | pcna | ENSCSEP00000028052 | ENSCSEP00000030429 | Chromatin licensing and DNA replication factor 1. | Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. | 0.964 |
ENSCSEP00000028052 | rbx1 | ENSCSEP00000028052 | ENSCSEP00000010314 | Chromatin licensing and DNA replication factor 1. | Ring-box 1, E3 ubiquitin protein ligase. | 0.547 |
ENSCSEP00000028052 | rfc1 | ENSCSEP00000028052 | ENSCSEP00000007615 | Chromatin licensing and DNA replication factor 1. | Replication factor C subunit 1. | 0.542 |
ENSCSEP00000028052 | wdhd1 | ENSCSEP00000028052 | ENSCSEP00000002353 | Chromatin licensing and DNA replication factor 1. | WD repeat and HMG-box DNA binding protein 1. | 0.844 |
LOC103378632 | Cul4b | ENSCSEP00000000797 | ENSCSEP00000003233 | Cullin 4A; Belongs to the cullin family. | Cullin 4B; Belongs to the cullin family. | 0.918 |
LOC103378632 | ENSCSEP00000028052 | ENSCSEP00000000797 | ENSCSEP00000028052 | Cullin 4A; Belongs to the cullin family. | Chromatin licensing and DNA replication factor 1. | 0.701 |
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