STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gga2VHS domain-containing protein. (98 aa)    
Predicted Functional Partners:
LOC103383561
Uncharacterized protein.
  
  
 
0.901
gga3
Golgi associated, gamma adaptin ear containing, ARF binding protein 3b.
     
 
0.900
LOC103385716
Macrophage stimulating 1 receptor a.
    
  0.569
LOC103386279
Macrophage stimulating 1 receptor b.
    
  0.569
met
MET proto-oncogene, receptor tyrosine kinase.
    
  0.569
LOC103397515
Uncharacterized protein.
     
 0.558
Rabgef1
RAB guanine nucleotide exchange factor (GEF) 1.
     
 0.558
LOC103378493
RAB guanine nucleotide exchange factor (GEF) 1, like.
     
 0.558
LOC103395101
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
    
 0.519
ENSCSEP00000002927
ADP-ribosylation factor 6a.
    
 0.519
Your Current Organism:
Cynoglossus semilaevis
NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.