STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hectd3HECT domain containing 3. (853 aa)    
Predicted Functional Partners:
ENSCSEP00000030272
Uncharacterized protein.
   
 
 0.732
Trip12
Thyroid hormone receptor interactor 12.
   
 
0.732
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.660
rps27a
Ribosomal protein S27a.
   
 0.603
ENSCSEP00000023759
Ubiquitin-like domain-containing protein.
    
 0.597
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.597
Atg7
ATG7 autophagy related 7 homolog (S. cerevisiae).
    
 0.522
Pgm2
Phosphoglucomutase 2; Belongs to the phosphohexose mutase family.
   
    0.516
pgm2l1
Phosphoglucomutase 2-like 1.
   
    0.516
ENSCSEP00000006819
Ubiquitin-like domain-containing protein.
   
 0.513
Your Current Organism:
Cynoglossus semilaevis
NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.