STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCSEP00000033441Uncharacterized protein. (142 aa)    
Predicted Functional Partners:
RAB7A
RAB7A, member RAS oncogene family.
    
 0.555
LOC103386171
RAB7a, member RAS oncogene family.
    
 0.555
gabarap
GABA(A) receptor-associated protein b.
   
 0.552
LOC103378875
Uncharacterized protein.
   
 0.552
LOC103379687
GABA(A) receptor-associated protein like 2.
   
 0.552
LOC103389533
Uncharacterized protein.
   
 0.536
RAB9A
RAB9A, member RAS oncogene family.
   
 0.536
ENSCSEP00000022711
RAB9B, member RAS oncogene family.
   
 0.536
armc5
Armadillo repeat containing 5.
   
 0.536
ENSCSEP00000010047
Microtubule-associated protein 1 light chain 3 beta.
   
 0.496
Your Current Organism:
Cynoglossus semilaevis
NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.