STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wdr78WD repeat domain 78. (743 aa)    
Predicted Functional Partners:
dynlrb1
Dynein light chain roadblock.
   
 0.805
dctn2
Dynactin 2 (p50).
    
 0.785
ENSCSEP00000015869
Tctex1 domain containing 1.
    
 0.741
dync2li1
Dynein, cytoplasmic 2, light intermediate chain 1.
    
 0.719
rsph9
Radial spoke head 9 homolog.
   
  
 0.702
LOC103395122
Dynein light chain.
    
 0.685
LOC103397138
Dynein light chain.
    
 0.685
LOC103397768
Dynein light chain 2, cytoplasmic.
    
 0.685
dnal4
Dynein light chain.
    
 0.685
dync1li2
Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes.
    
 0.660
Your Current Organism:
Cynoglossus semilaevis
NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.