STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIL12350.1Coproporphyrinogen III oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (390 aa)    
Predicted Functional Partners:
AIL12349.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.954
AIL13592.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.838
AIL12948.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.664
AIL13153.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.659
AIL12766.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.652
AIL12975.1
(dimethylallyl)adenosine tRNA methylthiotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.578
AIL13006.1
GTP-binding protein LepA; Back-translocating Elongation Factor EF4; binds to the ribosome on the universally-conserved alpha-sarcin loop; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.569
AIL12464.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.516
AIL12938.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.516
AIL12550.1
Transcription-repair coupling factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.510
Your Current Organism:
Paracaedimonas acanthamoebae
NCBI taxonomy Id: 244581
Other names: C. Paracaedimonas acanthamoebae, Caedibacter acanthamoebae, Candidatus Caedibacter acanthamoebae, Candidatus Paracaedimonas acanthamoebae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.