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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIL12407.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (438 aa)    
Predicted Functional Partners:
AIL13265.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.968
AIL13267.1
Ubiquinol-cytochrome C reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.960
AIL13099.1
Peptidase M16; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
0.936
AIL13266.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.915
AIL12437.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.864
AIL13344.1
Part of NADH-ubiquinone oxidoreductase complex I; shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; NuoF is part of the soluble NADH dehydrogenase fragment, which represents the electron input part of NADH dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.861
AIL13345.1
NADH dehydrogenase; Catalyzes the transfer of electrons from NADH to quinone; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.848
AIL12406.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.845
AIL12635.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    0.833
AIL12405.1
DNA mismatch repair protein MutL; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.831
Your Current Organism:
Paracaedimonas acanthamoebae
NCBI taxonomy Id: 244581
Other names: C. Paracaedimonas acanthamoebae, Caedibacter acanthamoebae, Candidatus Caedibacter acanthamoebae, Candidatus Paracaedimonas acanthamoebae
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