STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIL12581.150S ribosomal protein L24; Derived by automated computational analysis using gene prediction method: Protein Homology. (106 aa)    
Predicted Functional Partners:
rpmH
50S ribosomal protein L34; In Escherichia coli transcription of this gene is enhanced by polyamines; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.999
AIL12331.1
50S ribosomal protein L31; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.999
AIL12412.1
50S ribosomal protein L13; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.999
AIL12413.1
30S ribosomal protein S9; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.999
AIL12462.1
50S ribosomal protein L33; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.999
AIL12469.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.999
AIL12472.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.999
AIL12537.1
Translation initiation factor IF-1; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.999
AIL12565.1
30S ribosomal protein S12; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.999
AIL12566.1
30S ribosomal protein S7; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.999
Your Current Organism:
Paracaedimonas acanthamoebae
NCBI taxonomy Id: 244581
Other names: C. Paracaedimonas acanthamoebae, Caedibacter acanthamoebae, Candidatus Caedibacter acanthamoebae, Candidatus Paracaedimonas acanthamoebae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.