STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
frrRibosome-recycling factor. (185 aa)    
Predicted Functional Partners:
rpsB
30S ribosomal protein S2.
 
 
 0.998
tsf
Elongation factor Ts.
 
 
 0.998
pyrH
Uridylate kinase.
 
  
 0.998
rplM
50S ribosomal protein L13.
 
 
 0.996
rplQ
50S ribosomal protein L17.
 
 
 0.996
rplT
50S ribosomal protein L20.
 
 
 0.995
rplO
50S ribosomal protein L15.
  
 
 0.995
rplC
50S ribosomal protein L3.
  
 
 0.995
rplK
50S ribosomal protein L11.
  
 
 0.995
rpsD_1
30S ribosomal protein S4.
   
 
 0.994
Your Current Organism:
Paracaedibacter symbiosus
NCBI taxonomy Id: 244582
Other names: C. Paracaedibacter symbiosus, Candidatus Paracaedibacter symbiosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.