Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_000757605_01014 | artQ | GCA_000757605_01014 | GCA_000757605_01131 | Hypothetical protein. | Arginine transport system permease protein ArtQ. | 0.912 |
GCA_000757605_01014 | lolD | GCA_000757605_01014 | GCA_000757605_01077 | Hypothetical protein. | Lipoprotein-releasing system ATP-binding protein LolD. | 0.924 |
GCA_000757605_01014 | lptB | GCA_000757605_01014 | GCA_000757605_01371 | Hypothetical protein. | Lipopolysaccharide export system ATP-binding protein LptB. | 0.998 |
GCA_000757605_01014 | lptG | GCA_000757605_01014 | GCA_000757605_01015 | Hypothetical protein. | Lipopolysaccharide export system permease protein LptG. | 0.999 |
GCA_000757605_01014 | mkl_1 | GCA_000757605_01014 | GCA_000757605_01472 | Hypothetical protein. | Putative ribonucleotide transport ATP-binding protein mkl. | 0.606 |
GCA_000757605_01014 | mlaE_1 | GCA_000757605_01014 | GCA_000757605_01473 | Hypothetical protein. | Putative phospholipid ABC transporter permease protein MlaE. | 0.923 |
GCA_000757605_01014 | mlaE_2 | GCA_000757605_01014 | GCA_000757605_02237 | Hypothetical protein. | Putative phospholipid ABC transporter permease protein MlaE. | 0.923 |
GCA_000757605_01014 | msbA | GCA_000757605_01014 | GCA_000757605_02256 | Hypothetical protein. | Lipid A export ATP-binding/permease protein MsbA. | 0.930 |
artQ | GCA_000757605_01014 | GCA_000757605_01131 | GCA_000757605_01014 | Arginine transport system permease protein ArtQ. | Hypothetical protein. | 0.912 |
artQ | lolD | GCA_000757605_01131 | GCA_000757605_01077 | Arginine transport system permease protein ArtQ. | Lipoprotein-releasing system ATP-binding protein LolD. | 0.942 |
artQ | lptB | GCA_000757605_01131 | GCA_000757605_01371 | Arginine transport system permease protein ArtQ. | Lipopolysaccharide export system ATP-binding protein LptB. | 0.941 |
artQ | lptG | GCA_000757605_01131 | GCA_000757605_01015 | Arginine transport system permease protein ArtQ. | Lipopolysaccharide export system permease protein LptG. | 0.911 |
artQ | mkl_1 | GCA_000757605_01131 | GCA_000757605_01472 | Arginine transport system permease protein ArtQ. | Putative ribonucleotide transport ATP-binding protein mkl. | 0.939 |
artQ | yxeM | GCA_000757605_01131 | GCA_000757605_01291 | Arginine transport system permease protein ArtQ. | Putative amino-acid-binding protein YxeM. | 0.979 |
lolD | GCA_000757605_01014 | GCA_000757605_01077 | GCA_000757605_01014 | Lipoprotein-releasing system ATP-binding protein LolD. | Hypothetical protein. | 0.924 |
lolD | artQ | GCA_000757605_01077 | GCA_000757605_01131 | Lipoprotein-releasing system ATP-binding protein LolD. | Arginine transport system permease protein ArtQ. | 0.942 |
lolD | lptB | GCA_000757605_01077 | GCA_000757605_01371 | Lipoprotein-releasing system ATP-binding protein LolD. | Lipopolysaccharide export system ATP-binding protein LptB. | 0.932 |
lolD | lptG | GCA_000757605_01077 | GCA_000757605_01015 | Lipoprotein-releasing system ATP-binding protein LolD. | Lipopolysaccharide export system permease protein LptG. | 0.924 |
lolD | mkl_1 | GCA_000757605_01077 | GCA_000757605_01472 | Lipoprotein-releasing system ATP-binding protein LolD. | Putative ribonucleotide transport ATP-binding protein mkl. | 0.616 |
lolD | mlaE_1 | GCA_000757605_01077 | GCA_000757605_01473 | Lipoprotein-releasing system ATP-binding protein LolD. | Putative phospholipid ABC transporter permease protein MlaE. | 0.924 |
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