STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dsbBDisulfide bond formation protein B. (159 aa)    
Predicted Functional Partners:
bdbD
Disulfide bond formation protein D.
 
 
 0.930
GCA_000757605_02339
Hypothetical protein.
  
 
 0.920
GCA_000757605_01386
Hypothetical protein.
       0.812
flgG_1
Flagellar basal-body rod protein FlgG.
    
   0.795
flgG_2
Flagellar basal-body rod protein FlgG.
    
   0.795
flgG_3
Flagellar basal-body rod protein FlgG.
    
   0.795
GCA_000757605_02455
Hypothetical protein.
  
     0.676
GCA_000757605_02049
Hypothetical protein.
  
     0.603
recO
DNA repair protein RecO.
  
     0.536
GCA_000757605_01021
Hypothetical protein.
  
     0.525
Your Current Organism:
Paracaedibacter symbiosus
NCBI taxonomy Id: 244582
Other names: C. Paracaedibacter symbiosus, Candidatus Paracaedibacter symbiosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.