STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
luxQ_4Autoinducer 2 sensor kinase/phosphatase LuxQ. (165 aa)    
Predicted Functional Partners:
tdiR
Transcriptional regulatory protein TdiR.
  
 0.999
ctrA
Cell cycle response regulator CtrA.
 
 0.999
ompR
Transcriptional regulatory protein OmpR.
 
 0.999
GCA_000757605_01082
Putative signaling protein.
 
 0.999
flgC
Flagellar basal-body rod protein FlgC.
  
 
 0.999
barA_2
Signal transduction histidine-protein kinase BarA.
 0.999
GCA_000757605_01653
Hypothetical protein.
  
 0.999
barA_3
Signal transduction histidine-protein kinase BarA.
 0.999
pdhS
Cell-division control histidine kinase PdhS.
 0.999
rcp1_2
Response regulator rcp1.
 
 0.998
Your Current Organism:
Paracaedibacter symbiosus
NCBI taxonomy Id: 244582
Other names: C. Paracaedibacter symbiosus, Candidatus Paracaedibacter symbiosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.