Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_000757605_01142 | GCA_000757605_02322 | GCA_000757605_01142 | GCA_000757605_02322 | Hypothetical protein. | Putative HIT-like protein. | 0.689 |
GCA_000757605_01142 | cshA | GCA_000757605_01142 | GCA_000757605_01239 | Hypothetical protein. | DEAD-box ATP-dependent RNA helicase CshA. | 0.991 |
GCA_000757605_01142 | fliG | GCA_000757605_01142 | GCA_000757605_00641 | Hypothetical protein. | Flagellar motor switch protein FliG. | 0.712 |
GCA_000757605_01142 | rhlE | GCA_000757605_01142 | GCA_000757605_01141 | Hypothetical protein. | ATP-dependent RNA helicase RhlE. | 0.996 |
GCA_000757605_01142 | tlpA | GCA_000757605_01142 | GCA_000757605_01253 | Hypothetical protein. | Thiol:disulfide interchange protein TlpA. | 0.683 |
GCA_000757605_02322 | GCA_000757605_01142 | GCA_000757605_02322 | GCA_000757605_01142 | Putative HIT-like protein. | Hypothetical protein. | 0.689 |
GCA_000757605_02322 | cshA | GCA_000757605_02322 | GCA_000757605_01239 | Putative HIT-like protein. | DEAD-box ATP-dependent RNA helicase CshA. | 0.847 |
GCA_000757605_02322 | flgK | GCA_000757605_02322 | GCA_000757605_01819 | Putative HIT-like protein. | Flagellar hook-associated protein 1. | 0.809 |
GCA_000757605_02322 | fliG | GCA_000757605_02322 | GCA_000757605_00641 | Putative HIT-like protein. | Flagellar motor switch protein FliG. | 0.809 |
GCA_000757605_02322 | fliM | GCA_000757605_02322 | GCA_000757605_02013 | Putative HIT-like protein. | Flagellar motor switch protein FliM. | 0.809 |
GCA_000757605_02322 | rhlE | GCA_000757605_02322 | GCA_000757605_01141 | Putative HIT-like protein. | ATP-dependent RNA helicase RhlE. | 0.847 |
GCA_000757605_02322 | rpoB | GCA_000757605_02322 | GCA_000757605_01456 | Putative HIT-like protein. | DNA-directed RNA polymerase subunit beta. | 0.944 |
GCA_000757605_02322 | rpoC | GCA_000757605_02322 | GCA_000757605_01455 | Putative HIT-like protein. | DNA-directed RNA polymerase subunit beta'. | 0.953 |
GCA_000757605_02322 | rpoZ | GCA_000757605_02322 | GCA_000757605_01213 | Putative HIT-like protein. | DNA-directed RNA polymerase subunit omega. | 0.944 |
GCA_000757605_02322 | tlpA | GCA_000757605_02322 | GCA_000757605_01253 | Putative HIT-like protein. | Thiol:disulfide interchange protein TlpA. | 0.666 |
cshA | GCA_000757605_01142 | GCA_000757605_01239 | GCA_000757605_01142 | DEAD-box ATP-dependent RNA helicase CshA. | Hypothetical protein. | 0.991 |
cshA | GCA_000757605_02322 | GCA_000757605_01239 | GCA_000757605_02322 | DEAD-box ATP-dependent RNA helicase CshA. | Putative HIT-like protein. | 0.847 |
cshA | rpoB | GCA_000757605_01239 | GCA_000757605_01456 | DEAD-box ATP-dependent RNA helicase CshA. | DNA-directed RNA polymerase subunit beta. | 0.975 |
cshA | rpoC | GCA_000757605_01239 | GCA_000757605_01455 | DEAD-box ATP-dependent RNA helicase CshA. | DNA-directed RNA polymerase subunit beta'. | 0.936 |
cshA | rpoZ | GCA_000757605_01239 | GCA_000757605_01213 | DEAD-box ATP-dependent RNA helicase CshA. | DNA-directed RNA polymerase subunit omega. | 0.962 |
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