Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEM43627.1 | SEM43669.1 | SAMN04488003_101105 | SAMN04488003_101107 | Cell division protein FtsB. | Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | 0.699 |
SEM43627.1 | SEM43697.1 | SAMN04488003_101105 | SAMN04488003_101108 | Cell division protein FtsB. | Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase); The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | 0.691 |
SEM43627.1 | SEM48817.1 | SAMN04488003_101105 | SAMN04488003_101285 | Cell division protein FtsB. | Hypothetical protein. | 0.664 |
SEM43627.1 | SEM50790.1 | SAMN04488003_101105 | SAMN04488003_101359 | Cell division protein FtsB. | Hypothetical protein. | 0.685 |
SEM43627.1 | SEM67520.1 | SAMN04488003_101105 | SAMN04488003_10383 | Cell division protein FtsB. | Protein of unknown function. | 0.705 |
SEM43627.1 | SEM81761.1 | SAMN04488003_101105 | SAMN04488003_10533 | Cell division protein FtsB. | Hypothetical protein. | 0.670 |
SEM43627.1 | SEN45802.1 | SAMN04488003_101105 | SAMN04488003_11734 | Cell division protein FtsB. | Hypothetical protein. | 0.756 |
SEM43627.1 | SEN59827.1 | SAMN04488003_101105 | SAMN04488003_12237 | Cell division protein FtsB. | LPS-assembly lipoprotein. | 0.665 |
SEM43627.1 | ftsQ | SAMN04488003_101105 | SAMN04488003_101444 | Cell division protein FtsB. | Cell division protein FtsQ; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily. | 0.971 |
SEM43627.1 | pdhA | SAMN04488003_101105 | SAMN04488003_101106 | Cell division protein FtsB. | Pyruvate dehydrogenase E1 component alpha subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | 0.699 |
SEM43669.1 | SEM43627.1 | SAMN04488003_101107 | SAMN04488003_101105 | Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | Cell division protein FtsB. | 0.699 |
SEM43669.1 | SEM43697.1 | SAMN04488003_101107 | SAMN04488003_101108 | Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase); The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | 0.999 |
SEM43669.1 | pdhA | SAMN04488003_101107 | SAMN04488003_101106 | Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | Pyruvate dehydrogenase E1 component alpha subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | 0.999 |
SEM43697.1 | SEM43627.1 | SAMN04488003_101108 | SAMN04488003_101105 | Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase); The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | Cell division protein FtsB. | 0.691 |
SEM43697.1 | SEM43669.1 | SAMN04488003_101108 | SAMN04488003_101107 | Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase); The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | 0.999 |
SEM43697.1 | pdhA | SAMN04488003_101108 | SAMN04488003_101106 | Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase); The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | Pyruvate dehydrogenase E1 component alpha subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | 0.999 |
SEM48817.1 | SEM43627.1 | SAMN04488003_101285 | SAMN04488003_101105 | Hypothetical protein. | Cell division protein FtsB. | 0.664 |
SEM48817.1 | SEM50790.1 | SAMN04488003_101285 | SAMN04488003_101359 | Hypothetical protein. | Hypothetical protein. | 0.664 |
SEM48817.1 | SEM67520.1 | SAMN04488003_101285 | SAMN04488003_10383 | Hypothetical protein. | Protein of unknown function. | 0.706 |
SEM48817.1 | SEM81761.1 | SAMN04488003_101285 | SAMN04488003_10533 | Hypothetical protein. | Hypothetical protein. | 0.543 |
page 1 of 3