STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM77355.1Binding-protein-dependent transport system inner membrane component. (112 aa)    
Predicted Functional Partners:
SEM77297.1
Hypothetical protein.
     0.971
SEM77267.1
iron(III) transport system substrate-binding protein.
 
 
  0.935
SEN26334.1
iron(III) transport system substrate-binding protein.
  
 
 0.842
SEM85733.1
iron(III) transport system substrate-binding protein.
  
 
  0.821
SEM77374.1
ABC transporter.
 
  
  0.815
SEM77476.1
Probable phosphoglycerate mutase; Belongs to the phosphoglycerate mutase family.
 
     0.682
SEM77236.1
iron(III) transport system substrate-binding protein.
  
 
  0.672
SEM77402.1
iron(III) transport system ATP-binding protein.
    
  0.647
cysC
Sulfate adenylyltransferase; Catalyzes the synthesis of activated sulfate.
     
 0.626
SEM77440.1
Hypothetical protein.
       0.605
Your Current Organism:
Loktanella fryxellensis
NCBI taxonomy Id: 245187
Other names: CIP 108323, DSM 16213, JCM 21635, L. fryxellensis, LMG 22007, LMG:22007, Loktanella fryxellensis Van Trappen et al. 2004, NBRC 102485
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.