STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM89592.1Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase). (371 aa)    
Predicted Functional Partners:
SEM89562.1
3-oxoadipate enol-lactonase.
 
    0.873
SEM89531.1
Polysaccharide deacetylase.
 
     0.872
SEM89504.1
2-polyprenyl-6-methoxyphenol hydroxylase.
 
     0.834
SEM89816.1
Hypothetical protein.
  
     0.758
SEM53057.1
NAD(P)H-dependent FMN reductase.
  
 0.638
SEM89448.1
NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family.
 
 
 0.620
SEM89669.1
Kynurenine formamidase.
 
     0.584
SEM85193.1
NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family.
 
 
 0.549
SEM90141.1
Predicted dehydrogenase.
  
     0.549
SEM90190.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.548
Your Current Organism:
Loktanella fryxellensis
NCBI taxonomy Id: 245187
Other names: CIP 108323, DSM 16213, JCM 21635, L. fryxellensis, LMG 22007, LMG:22007, Loktanella fryxellensis Van Trappen et al. 2004, NBRC 102485
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