STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM97719.1General stress protein 26. (160 aa)    
Predicted Functional Partners:
SEM49255.1
Uncharacterized conserved protein YjbJ, UPF0337 family; Belongs to the UPF0337 (CsbD) family.
  
    0.867
SEN36940.1
Hypothetical protein.
   
    0.674
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
       0.581
SEM97628.1
Uncharacterized conserved protein, contains Zn-finger domain.
 
     0.548
SEM60149.1
PAS domain S-box-containing protein.
  
     0.529
SEM48640.1
Hypothetical protein.
   
    0.514
SEN87105.1
NAD(P)H-binding.
   
    0.514
SEN91521.1
Hypothetical protein.
   
    0.514
SEN91279.1
Two-component sensor histidine kinase, contains HisKA and HATPase domains.
  
     0.485
SEM97657.1
Conserved hypothetical protein.
       0.484
Your Current Organism:
Loktanella fryxellensis
NCBI taxonomy Id: 245187
Other names: CIP 108323, DSM 16213, JCM 21635, L. fryxellensis, LMG 22007, LMG:22007, Loktanella fryxellensis Van Trappen et al. 2004, NBRC 102485
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.