Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEM48442.1 | SEN16077.1 | SAMN04488003_101270 | SAMN04488003_11040 | N-acetylmuramoyl-L-alanine amidase. | Outer membrane lipoprotein-sorting protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.894 |
SEM59045.1 | SEM59073.1 | SAMN04488003_10228 | SAMN04488003_10229 | Putative ABC transport system permease protein. | Putative ABC transport system ATP-binding protein. | 0.942 |
SEM59045.1 | SEM66226.1 | SAMN04488003_10228 | SAMN04488003_10336 | Putative ABC transport system permease protein. | Putative ABC transport system ATP-binding protein. | 0.807 |
SEM59045.1 | SEN16077.1 | SAMN04488003_10228 | SAMN04488003_11040 | Putative ABC transport system permease protein. | Outer membrane lipoprotein-sorting protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.869 |
SEM59045.1 | SEN74805.1 | SAMN04488003_10228 | SAMN04488003_13210 | Putative ABC transport system permease protein. | Putative ABC transport system ATP-binding protein. | 0.655 |
SEM59045.1 | SEN78784.1 | SAMN04488003_10228 | SAMN04488003_13613 | Putative ABC transport system permease protein. | Hypothetical protein. | 0.680 |
SEM59073.1 | SEM59045.1 | SAMN04488003_10229 | SAMN04488003_10228 | Putative ABC transport system ATP-binding protein. | Putative ABC transport system permease protein. | 0.942 |
SEM59073.1 | SEM66194.1 | SAMN04488003_10229 | SAMN04488003_10335 | Putative ABC transport system ATP-binding protein. | Putative ABC transport system permease protein. | 0.696 |
SEM59073.1 | SEN16077.1 | SAMN04488003_10229 | SAMN04488003_11040 | Putative ABC transport system ATP-binding protein. | Outer membrane lipoprotein-sorting protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.800 |
SEM59073.1 | SEN74833.1 | SAMN04488003_10229 | SAMN04488003_13211 | Putative ABC transport system ATP-binding protein. | Putative ABC transport system permease protein. | 0.999 |
SEM59073.1 | SEN88992.1 | SAMN04488003_10229 | SAMN04488003_1555 | Putative ABC transport system ATP-binding protein. | Lipoprotein-releasing system permease protein. | 0.975 |
SEM66194.1 | SEM59073.1 | SAMN04488003_10335 | SAMN04488003_10229 | Putative ABC transport system permease protein. | Putative ABC transport system ATP-binding protein. | 0.696 |
SEM66194.1 | SEM66226.1 | SAMN04488003_10335 | SAMN04488003_10336 | Putative ABC transport system permease protein. | Putative ABC transport system ATP-binding protein. | 0.980 |
SEM66194.1 | SEN16077.1 | SAMN04488003_10335 | SAMN04488003_11040 | Putative ABC transport system permease protein. | Outer membrane lipoprotein-sorting protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.869 |
SEM66194.1 | SEN74805.1 | SAMN04488003_10335 | SAMN04488003_13210 | Putative ABC transport system permease protein. | Putative ABC transport system ATP-binding protein. | 0.655 |
SEM66194.1 | SEN78784.1 | SAMN04488003_10335 | SAMN04488003_13613 | Putative ABC transport system permease protein. | Hypothetical protein. | 0.638 |
SEM66226.1 | SEM59045.1 | SAMN04488003_10336 | SAMN04488003_10228 | Putative ABC transport system ATP-binding protein. | Putative ABC transport system permease protein. | 0.807 |
SEM66226.1 | SEM66194.1 | SAMN04488003_10336 | SAMN04488003_10335 | Putative ABC transport system ATP-binding protein. | Putative ABC transport system permease protein. | 0.980 |
SEM66226.1 | SEN16077.1 | SAMN04488003_10336 | SAMN04488003_11040 | Putative ABC transport system ATP-binding protein. | Outer membrane lipoprotein-sorting protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.800 |
SEM66226.1 | SEN74833.1 | SAMN04488003_10336 | SAMN04488003_13211 | Putative ABC transport system ATP-binding protein. | Putative ABC transport system permease protein. | 0.999 |
page 1 of 3